SOLAR Commands¶
Select a command to read its help text. Everything is also on a single reference page, which the site search covers.
Definitions¶
- about
- allcovar
- allsnp
- alnorm
- annotate_gwas
- ascertainment
- automodel
- bayesavg
- benice
- blank
- boundary
- boundary-notes
- build_grm
- catenate
- change-notes
- chi
- chinc
- chromosome
- clod
- combinations
- constraint
- copybin
- countfields
- covariate
- create_evd_data
- create_fake_pedigree
- d2e
- d2e2
- define
- deputy
- discrete-notes
- doc
- dominance-notes
- doranch
- drand
- empirical_pedigree
- empp
- epedigree
- ephenotypes
- epistasis
- evdinev
- evdinx
- evdiny
- evdinz
- evdmat
- evdout
- example
- exclude
- factorial
- fakedata
- faketraits
- fformat
- field
- file-freq
- file-map
- file-marker
- file-matrix
- file-pedigree
- file-phenotypes
- finemap
- fix
- fphi
- freq
- full_filename
- gen_corr
- gpu_fphi
- gpu_gwas
- gpu_pedifromsnps
- grid
- gridh2r
- gsd2h2q
- gsd2h2r
- gsd2sd
- gwas
- h2power
- help
- helpadd
- hlod
- house
- howmanyranch
- ibd
- ibddir
- ibdoption
- ibs
- if_global_exists
- if_parameter_exists
- inormal
- interval
- intraitclass
- invert
- is_nan
- joinfiles
- key
- linkgsd
- linkmod
- linkqsd
- linkqsd0
- load
- load_house
- loadkin
- lod
- lodadj
- lodn
- lodp
- loglike
- madj
- map
- marker
- markertest
- mask
- matcrc
- mathmatrix
- matrix
- maximize
- memory
- mg_topedsys
- mga
- mgassoc
- mibd
- mibddir
- miniplot
- model
- mu
- multipoint
- needk2
- newmod
- newtcl
- nifti_to_csv
- normal
- null
- nulln
- old_zscore
- omega
- option
- outdir
- parameter
- ped2csv
- pedifromsnps
- pedigree
- pedlike
- pedlod
- perdelta
- perturb
- phenotypes
- plink_converter
- plink_freq
- plot
- plotqtld
- plotqtn
- polyclass
- polyclass_normalize
- polygenic
- polygsd
- polymod
- polyvoxel
- power
- putsa
- putsat
- putsnew
- putsout
- qtld
- qtnm
- quadratic
- read_arglist
- read_model
- read_output
- register
- relatives
- relpairs
- remlist
- remove_global
- residual
- retext
- retextpc
- round_epedigree
- rvi
- save
- scale
- screencov
- selectfields
- selectrecords
- setappend
- setxor
- shortcut
- showproc
- siminf
- simqtl
- slod
- snp
- snphap
- solarfile
- solarmodel
- solartcl
- solarversion
- split_class_file
- sporadic
- sporadic_normalize
- sporclass
- spormod
- startclock
- stats
- stats_get
- stepfor
- stepup
- stopclock
- string_imatch
- stringplot
- stringsub
- tablefile
- tclgr
- tdist
- timediff
- toscript
- trait
- transpose
- twopoint
- upgrade
- usage
- usort
- vcfinfo
- vcfselect
- verbosity
- voxel
- whoranch
- write_subject_ids
- zs
- zscore
See also¶
- Manual for Tcl Commands (external)